Osiris: accessible and reproducible phylogenetic and phylogenomic analyses within the Galaxy workflow management system.

Todd H. Oakley

Todd H. Oakley Markos A. Alexandrou Roger Ngo M. Sabrina Pankey Celia K. Churchill William Chen Karl B. Lopker Osiris: accessible and reproducible phylogenetic and phylogenomic analyses within the Galaxy workflow management system. 230 2014 15 BMC Bioinform. https://doi.org/10.1186/1471-2105-15-230 https://www.wikidata.org/entity/Q28652417 db/journals/bmcbi/bmcbi15.html#OakleyANPCCL14

Daniel I. Speiser M. Sabrina Pankey Alexander K. Zaharoff Barbara A. Battelle Heather D. Bracken-Grissom Jesse W. Breinholt Seth M. Bybee Thomas W. Cronin Anders Garm Annie R. Lindgren Nipam H. Patel Megan L. Porter Meredith E. Protas Ajna S. Rivera Jeanne M. Serb Kirk S. Zigler Keith A. Crandall Todd H. Oakley Using phylogenetically-informed annotation (PIA) to search for light-interacting genes in transcriptomes from non-model organisms. 350 2014 15 BMC Bioinform. https://doi.org/10.1186/s12859-014-0350-x https://www.wikidata.org/entity/Q34630150 db/journals/bmcbi/bmcbi15.html#SpeiserPZBBBBCGLPPPRSZCO14

Onur Sakarya Kenneth S. Kosik Todd H. Oakley Reconstructing ancestral genome content based on symmetrical best alignments and Dollo parsimony. 606-612 2008 24 Bioinform. 5 https://doi.org/10.1093/bioinformatics/btn005 https://www.wikidata.org/entity/Q43982119 db/journals/bioinformatics/bioinformatics24.html#SakaryaKO08

Markos A. Alexandrou Barbara A. Battelle Heather D. Bracken-Grissom Jesse W. Breinholt Seth M. Bybee William Chen Celia K. Churchill Keith A. Crandall Thomas W. Cronin Anders Garm Kenneth S. Kosik Annie R. Lindgren Karl B. Lopker Roger Ngo M. Sabrina Pankey Nipam H. Patel Megan L. Porter Meredith E. Protas Ajna S. Rivera Onur Sakarya Jeanne M. Serb Daniel I. Speiser Alexander K. Zaharoff Kirk S. Zigler