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PCA Analysis of Data2.csv Results

The document performs a principal component analysis (PCA) on a dataset with 8 variables (X2-X9) and 70 observations. It shows the loadings/weights of each original variable on the first 8 principal components, which explain 12.5% of the variance each. It also displays the component scores, which are the coordinates of the observations in the new subspace defined by the principal components.
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0% found this document useful (0 votes)
47 views6 pages

PCA Analysis of Data2.csv Results

The document performs a principal component analysis (PCA) on a dataset with 8 variables (X2-X9) and 70 observations. It shows the loadings/weights of each original variable on the first 8 principal components, which explain 12.5% of the variance each. It also displays the component scores, which are the coordinates of the observations in the new subspace defined by the principal components.
Copyright
© © All Rights Reserved
We take content rights seriously. If you suspect this is your content, claim it here.
Available Formats
Download as DOCX, PDF, TXT or read online on Scribd

> d<-[Link]("E:/Qodri/Data2.

csv",header = TRUE,sep = ":")


> pca<-princomp(Data3[-1],cor = T,scores = T)
> loadings(pca) #menunjukkan vektor ciri

Loadings:
Comp.1 Comp.2 Comp.3 Comp.4 Comp.5 Comp.6 Comp.7 Comp.8
X2 0.537 0.186 0.137 0.162 0.509 0.602
X3 -0.182 0.801 -0.226 -0.266 0.400 0.191
X4 0.528 -0.161 -0.597 0.291 -0.304 0.394
X5 -0.264 0.346 0.314 0.532 0.614 -0.206
X6 0.493 -0.113 -0.252 0.341 -0.133 0.574 -0.462
X7 -0.299 -0.527 -0.351 0.126 0.342 -0.204 0.351 0.460
X8 -0.262 0.493 -0.207 0.411 -0.542 -0.239 0.108 0.338
X9 0.484 0.188 0.182 -0.690 -0.450 0.137

Comp.1 Comp.2 Comp.3 Comp.4 Comp.5 Comp.6 Comp.7 Comp.8


SS loadings 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
Proportion Var 0.125 0.125 0.125 0.125 0.125 0.125 0.125 0.125
Cumulative Var 0.125 0.250 0.375 0.500 0.625 0.750 0.875 1.000
> summary(pca)
Importance of components:
Comp.1 Comp.2 Comp.3 Comp.4 Comp.5
Comp.6
Standard deviation 1.2621535 1.1068610 1.0456131 0.9933843 0.9212732
0.9090198
Proportion of Variance 0.1991289 0.1531427 0.1366633 0.1233515 0.1060930
0.1032896
Cumulative Proportion 0.1991289 0.3522716 0.4889349 0.6122865 0.7183795
0.8216691
Comp.7 Comp.8
Standard deviation 0.88301180 0.80432397
Proportion of Variance 0.09746373 0.08086713
Cumulative Proportion 0.91913287 1.00000000
> pca$scores
Comp.1 Comp.2 Comp.3 Comp.4 Comp.5
Comp.6
[1,] -0.231546317 1.46870308 -1.277609850 0.77815857 -0.8803944960 -
1.59459819
[2,] -0.219986531 -0.61533588 0.211465273 -0.77261378 0.3253018560
0.22674519
[3,] 0.210973486 -0.27363824 0.484755800 -0.97486027 0.4743868986
1.05674513
[4,] 0.047444973 -0.70294913 0.956521553 0.11700920 -0.3300653331
1.16910865
[5,] 0.796053023 -0.49250484 -0.259005446 -1.62218986 0.1939180512 -
0.79431182
[6,] -0.053235714 1.20948815 -1.540075612 -1.14936706 0.5221367831
0.12900646
[7,] 0.006487820 1.21723035 -0.259146805 -1.39260668 0.2542629684
0.02319613
[8,] -0.888932717 0.69913136 0.569336475 0.65022163 -0.2636120001
0.38725360
[9,] 0.496370623 0.28190365 -0.232702675 -1.77038077 -0.1828445961
0.26808700
[10,] -0.864640255 -0.06327094 0.215951291 -0.31433060 -0.5572518281
0.28694273
[11,] -0.492001362 -1.00708788 0.626700546 -0.60278330 0.0025026007
0.01376955
[12,] 1.524423849 -0.86722886 0.157979535 -1.07976929 0.2362157497 -
1.82096143
[13,] 0.857893320 -0.72783523 0.224602759 -0.08522281 0.6207959661
0.95867677
[14,] 0.599075440 1.35785952 0.710929959 1.36814964 1.3878746259
1.71812062
[15,] 1.176054726 -0.18939484 0.688620869 0.02449106 0.1127695838
0.59736247
[16,] 0.630493663 -0.73293307 0.309179909 -0.20510218 0.5408980202
0.45003520
[17,] 0.195318128 -0.27309705 0.894708298 -1.06119094 0.3639364756
1.15783388
[18,] -1.260163208 -0.07312684 -1.343524817 0.71842140 -0.7535217524
0.90849767
[19,] 0.432716143 1.74922870 -1.110063247 0.25891999 -0.2617344397
0.22174837
[20,] -0.416410575 0.19051439 0.589293174 0.78705376 0.0887680923
0.78952309
[21,] -0.389776130 0.53257113 -0.565147114 0.24593204 -0.5358198645 -
0.15526149
[22,] 0.437154254 -0.16605698 3.885687745 -0.21067587 -1.5227950659 -
1.35500104
[23,] 0.167581609 -0.99391904 0.400612607 -0.08800993 0.1708070033
0.53113112
[24,] -0.865292010 -1.00095321 -0.365218361 0.10053202 -0.0448772425
0.74838640
[25,] -1.216714153 0.44157779 0.043575819 0.52062651 -1.4887631690
0.12102285
[26,] 0.009972981 1.19037167 1.018667197 -1.64544125 -0.0608735622 -
0.35144094
[27,] 1.130002235 -1.40248801 0.552154601 0.40117386 0.4051555073 -
1.60277859
[28,] 0.213314606 -0.57041145 -0.226979908 -0.04113619 -1.1198207456
1.11099001
[29,] 0.450578902 -0.59652495 -0.263967832 0.07340383 -1.0785872694
0.86962357
[30,] 0.508143380 -0.34393096 -0.307818631 -0.21122834 -0.8977831718
0.61993705
[31,] -0.007432148 -0.38668323 0.038302913 -1.34864493 -0.6181231278
0.26958084
[32,] 0.696474111 -1.09411735 1.902066527 0.33032850 -0.3715550127 -
0.04324256
[33,] -0.851498687 1.18399835 0.569835541 -0.83627186 0.6127981704 -
0.24718560
[34,] 0.332632460 -0.40658771 -1.131747404 -1.65552259 0.5053050319
1.23150891
[35,] 1.124993567 -0.05435151 0.524733654 -0.06063035 0.3534144898
0.03201379
[36,] 1.052622645 0.01900601 0.541056668 -0.11133926 0.3135133624
0.54434312
[37,] 0.402045078 0.19952181 -0.420200811 -0.44812753 0.4902630741
1.09357959
[38,] -0.281160960 1.26187147 -1.499315857 0.43667746 -0.5021311090 -
0.57919301
[39,] -0.073539754 -0.00961512 0.397884347 0.16493633 -0.5004488714
0.98960883
[40,] 7.545004133 -1.12553247 -2.428531394 3.10276525 -0.9436596553 -
0.52207664
[41,] -1.352961580 2.46177981 -0.763397342 -0.54604135 0.0891893006 -
0.35336158
[42,] 2.339470620 0.87883022 0.483588687 0.76514767 0.2740363445 -
0.85187731
[43,] -0.488295939 -0.11403724 0.689970950 -0.89807638 -0.1722469336
0.49943441
[44,] -0.141415927 0.47677496 -0.902463061 0.25554283 -1.6520054066
0.77209793
[45,] 0.396675347 -0.15982743 -0.082302052 0.43297208 1.3491935474
1.07799176
[46,] -1.773281637 1.95469658 2.782903758 3.82356562 4.3927036227 -
0.10243925
[47,] 0.183137660 -0.62013519 0.341421826 -1.25715107 -0.6455471600 -
0.87518067
[48,] -0.707768907 -0.37078570 -0.018993662 -0.54529705 -0.1423105545
0.29458283
[49,] 0.855723424 0.27136870 0.779761150 -1.41541424 0.8249438837
0.46712626
[50,] -1.639718095 2.20874836 -0.867190903 1.82646804 0.0353690441
0.63116388
[51,] -0.022149958 0.13200188 -1.200730019 -0.43048512 0.3159661868 -
0.06843744
[52,] -0.117435862 -2.18187969 -0.896898404 0.63706989 1.2988944886 -
2.34594604
[53,] -0.307432205 -0.75020223 -0.294644397 0.28235139 -1.4949353640
0.25958180
[54,] 0.569829429 1.76782357 -1.640458809 -0.72731438 0.6333236242 -
2.56355060
[55,] -2.136843757 -2.49642981 -0.917350717 1.10376933 0.2536283956 -
0.54500248
[56,] -1.055535705 0.48133429 0.047976954 0.56958171 -1.4237752274
0.27689119
[57,] 0.548509450 -1.24198475 1.284395117 0.19820244 0.0330009664 -
1.72721826
[58,] 1.742118178 2.38839378 -0.986010372 -1.67314243 1.3668407626 -
1.23524946
[59,] -0.895575990 -0.17050094 -0.049283157 -0.01167650 -0.6834557078
0.67841686
[60,] -0.976891320 -1.28571897 2.621174727 -0.82585684 -0.7849196838 -
0.51374872
[61,] 0.527024439 -0.95730843 0.387678302 0.33979752 -0.1083105009
0.33470986
[62,] -1.751222655 -3.65573666 -0.532745580 0.23967071 1.3325288925 -
0.61045490
[63,] 1.696926044 -0.23338911 0.865470426 0.14495557 0.4796871685 -
1.29349698
[64,] 0.231253607 0.68506491 -0.090435027 -0.29063458 -0.1155078242
1.38252368
[65,] 0.233653869 0.83937774 0.528308430 1.91191446 -0.3794538224
0.18964424
[66,] 0.248642038 -0.37272353 0.447503579 0.60965095 -0.4443606111
0.14270623
[67,] -0.121467562 -0.29709497 0.368655933 -0.41899938 0.0485494463
0.80136547
[68,] -0.723513043 0.73823835 -0.240792933 1.71271912 -0.4935413488 -
0.26629702
[69,] -1.030888422 -0.45304236 1.312809749 0.33587142 1.6116280133 -
0.21740772
[70,] -0.584329682 1.23575488 -0.908691652 -1.54242268 0.4131831361 -
0.44252538
[71,] -0.262341358 0.48997962 -1.369044664 -0.64215337 0.5329204403
1.52856005
[72,] -3.020572062 -3.46798052 -4.149410623 0.37098998 2.4797320766 -
0.02445661
[73,] -0.961188065 0.13910435 0.629697047 1.02240477 -0.2503428946
0.24698521
[74,] -0.441141413 1.27690952 0.006010176 -0.83310399 1.1556067282 -
1.04798399
[75,] -0.651489179 0.93529025 -0.309603471 -2.02140441 0.4749293231 -
0.25708563
[76,] 0.032290215 -0.08264606 0.354357108 -0.21584586 0.0001251183 -
0.67605027
[77,] -0.489697653 1.19940737 0.319896353 0.66160570 0.0497708207 -
1.25759595
[78,] 3.945774334 0.84054466 -0.227217954 0.20431427 1.9900045254
1.95244978
[79,] -2.149997252 1.72736941 -0.250521842 1.08556088 -1.4244309325 -
0.56548957
[80,] 0.751550496 -1.19517837 -0.655462324 -0.43882606 -0.1331470541
0.66751459
[81,] -0.018382414 -1.32500584 0.384638417 0.48698359 -0.4599654635
0.48716099
[82,] -0.647940991 0.39383605 -0.654481701 0.20492157 -0.2686320941 -
1.86137102
[83,] -0.307222597 -0.36503298 -0.341526298 1.01656269 -0.9168266855 -
0.75283199
[84,] -0.587073312 0.52514013 -0.135384623 0.55428431 -1.1759100436 -
1.14194963
[85,] -0.377162748 -0.13410791 -0.817310217 0.77335743 -0.6099218328 -
0.81176668
[86,] -0.666146753 0.55251168 -0.973151934 1.12172294 -1.1843621854
1.07285400
[87,] -0.736276403 -0.12600324 0.291777163 0.62160905 -1.1429307222 -
0.02338864
[88,] 0.024208852 -0.59779647 0.868668212 -0.13936820 -0.2456122342 -
0.01924614
[89,] -0.188477756 -0.57963040 0.505887444 -0.16549142 -0.1886351246 -
0.06648667
[90,] 0.073555562 -0.19950490 0.689384935 -0.66621806 0.0449695576 -
0.70419166
Comp.7 Comp.8
[1,] -1.078712643 0.27739496
[2,] -0.551263099 -1.08519091
[3,] 0.337101815 -0.29528462
[4,] -0.092772448 0.14525153
[5,] -0.782591235 -0.59019759
[6,] 1.268271174 -0.46522246
[7,] 1.459726574 0.08381470
[8,] 0.570965748 -0.06635921
[9,] 0.220595541 0.12079655
[10,] 0.159098008 -0.44144036
[11,] -0.623304630 -1.32199812
[12,] -1.448886512 -0.32651652
[13,] -0.499851744 0.06270668
[14,] 0.255328437 0.97993809
[15,] 0.309533119 0.39711677
[16,] -0.897022601 -0.26917212
[17,] 0.516643609 -0.11557825
[18,] -0.533835786 -0.54490041
[19,] -0.262681908 1.07945186
[20,] 0.271957987 -0.21848976
[21,] -0.590677849 -0.08717450
[22,] 2.118652368 1.55390870
[23,] -1.025164288 -0.82902940
[24,] -0.543288588 -0.61277417
[25,] 0.092091778 -0.05700206
[26,] 1.541709257 0.41872673
[27,] -1.666591181 -0.91480730
[28,] -0.514289690 0.42749305
[29,] -0.579672514 0.40431069
[30,] -0.541425656 0.50072042
[31,] -0.023521350 -0.25999469
[32,] 0.069931833 0.56350626
[33,] 1.234288931 -0.24552754
[34,] 0.046086825 0.09685765
[35,] -0.678817504 0.46677493
[36,] -0.421566730 0.59088787
[37,] 0.067224267 0.15858727
[38,] -0.870180496 0.02539162
[39,] -0.005652717 0.26356993
[40,] 3.988539011 -2.61049044
[41,] 1.007846416 -0.40587916
[42,] -0.564335469 2.33417919
[43,] 0.520762779 -0.47615118
[44,] -0.412619461 0.82885209
[45,] -0.894977849 -0.56204708
[46,] -0.034825280 -1.87251409
[47,] -0.327865979 -0.45273706
[48,] -0.145716418 -1.01770271
[49,] 0.517938666 0.21324300
[50,] -0.133115833 -0.17826799
[51,] -0.657840748 -1.43979244
[52,] -0.856509956 0.78142666
[53,] -0.107528608 0.56954337
[54,] -1.179105400 -0.25904196
[55,] 1.503132741 2.03833576
[56,] 0.135207728 0.15382621
[57,] -0.534122833 0.09907849
[58,] 0.493391606 0.82219892
[59,] -0.093368122 -0.68394756
[60,] 1.534775936 -0.07500187
[61,] 0.665133106 -0.20764733
[62,] 1.092263558 0.97407035
[63,] -1.222874797 0.57048478
[64,] 0.458755441 0.48739996
[65,] -0.464413723 1.10010166
[66,] -0.753480272 0.26431527
[67,] 0.141950312 -0.01438911
[68,] -0.910301255 -0.08603231
[69,] 0.224380920 -1.12302754
[70,] 0.629563663 -0.42534961
[71,] -0.498910638 -0.56838919
[72,] 1.706025483 1.45118791
[73,] 0.606099830 0.19022597
[74,] 0.937721545 -0.01211475
[75,] 0.712961379 -0.93895744
[76,] 0.147110726 0.46487463
[77,] 0.501272609 0.76135883
[78,] -1.087898407 2.62855312
[79,] 1.055907788 -0.11030460
[80,] -1.528441085 -0.53249138
[81,] 0.742822698 -0.75619266
[82,] 0.274467241 0.90749946
[83,] -0.624051130 -0.53588281
[84,] -0.184067696 -0.14331989
[85,] -0.587405751 -0.48395755
[86,] -0.348163907 0.15749382
[87,] -0.505194977 -0.23495915
[88,] -0.407180229 -0.37216368
[89,] -0.631664875 -0.62407198
[90,] -0.209486587 -0.46597116
> plot(pca,type = "lines") #screeplot
> plot(pca$scores) #plot skor KU
> plot(pca$scores,labels=d$name) #memberikan label nama pada plot
> abline(h=0,v=0)

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