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MargoSolo/README.md

Margarita Soloshenko

Clinical Genetics • Biostatistics

Biostatistician developing bioinformatics pipelines for rare disease diagnostics and genetic variant analysis


Technical Stack

Genomics: AlphaGenome integration, pseudogene pathogenicity prediction, variant interpretation pipelines
Analysis: Python (pandas, scikit-learn, PyTorch), R (tidyverse, tidymodels), survival analysis, causal inference
Clinical: Pharmacoepidemiology, rare disease diagnostics, HPO phenotype modeling, regulatory genomics
Infrastructure: C/C++ (Ecole 42), Linux, SQL, Git


Current Work

  • Processed pseudogene regulatory effect prediction models
  • Temporal phenotypic trajectory analysis using HPO ontologies
  • UMAP-based phenotypic space visualization

Contact

LinkedIn

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  1. DataMedLinkedIn DataMedLinkedIn Public

    This GitHub repository is a resource for those interested in biomedical data analysis and visualization with R. It features code snippets for data processing, statistical analysis, and interactive …

    R 9 3

  2. FDF FDF Public

    FDF (Fil de Fer) is a small program that allows the user to create and visualize 3D wireframe models. A wireframe model is a simplified representation of a 3D object, composed of lines and curves t…

    C

  3. Fractol Fractol Public

    The Fractol project is implemented in C and utilizes the SDL2 library for rendering. It includes features such as zooming, panning, and changing the color palette of the fractals.

    C

  4. RT RT Public

    This project aims to implement the ray tracing method for constructing 3D images of objects.

    C

  5. Rtv1-project Rtv1-project Public

    C

  6. W3D W3D Public

    The Wolfenstein 3D project is a re-implementation of the original game using C and the SDL2 library. It includes all of the features of the original game, such as enemies, weapons, power-ups, and s…

    C