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1. genomic-medicine-sweden/TRANA genomic-medicine-sweden/TRANA Public

   Taxonomic Reconstruction and Analysis of NGS Amplicons - A pipeline based on EMU, a taxonomic profiler optimized for long 16S rRNA reads.

   Nextflow 19 6

2. extract_qc_ont extract_qc_ont Public

   A tool to extract qc data from ont sequencing report files

   Shell 1

3. JASEN JASEN Public

   Forked from genomic-medicine-sweden/jasen

   Epitypification pipeline for clinical NGS data. Written in NextFlow, Python & Bash.

   Python

4. workshop2 workshop2 Public

   This is a test project

   Nextflow

5. bioconda/bioconda-recipes bioconda/bioconda-recipes Public

   Conda recipes for the bioconda channel.

   Shell 1.8k 3.9k

6. nf-core/taxprofiler nf-core/taxprofiler Public

   Highly parallelised multi-taxonomic profiling of shotgun short- and long-read metagenomic data

   Nextflow 184 64