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Learning Universal Representations of Intermolecular Interactions with ATOMICA

Jupyter Notebook 202 29 Updated Mar 5, 2026

BioNeMo Framework: For building and adapting AI models in drug discovery at scale

Jupyter Notebook 679 126 Updated Mar 13, 2026

Simple, unified interface to multiple Generative AI providers

Python 13,550 1,424 Updated Dec 15, 2025

A Python package for molecular docking with an extensive, highly-curated dataset and a set of realistic benchmark tasks for drug discovery.

Python 178 32 Updated Oct 6, 2025

Google Research

Jupyter Notebook 37,449 8,358 Updated Mar 12, 2026

OpenFF NAGL

Python 19 4 Updated Feb 10, 2026

OpenMM is a toolkit for molecular simulation using high performance GPU code.

C++ 1,815 589 Updated Mar 12, 2026

Host-guest system data and simulations

Python 1 4 Updated Sep 20, 2021

Experimental and calculated small molecule hydration free energies

Python 136 56 Updated Oct 14, 2022

core data models of the Open Free Energy ecosystem

Python 40 12 Updated Mar 13, 2026

The Open Free Energy toolkit

Python 259 41 Updated Mar 13, 2026

A project (and object) for storing, manipulating, and converting molecular mechanics data.

Python 88 25 Updated Mar 12, 2026

Foster the development of impactful AI models in drug discovery.

Python 140 11 Updated Aug 22, 2025

Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2

Python 3,287 664 Updated Dec 16, 2025

A python package which enables CG residues in a working version of PyRosetta

Jupyter Notebook 6 1 Updated Aug 16, 2023

An API Client package to access the APIs for NBA.com

Python 3,493 692 Updated Mar 9, 2026

Style guides for Google-originated open-source projects

HTML 39,095 12,998 Updated Nov 13, 2025

Matbench: Benchmarks for materials science property prediction

Python 190 59 Updated Aug 20, 2024

Yet another redundant workflow engine

Python 577 53 Updated Dec 10, 2025

Working with molecular structures in pandas DataFrames

Python 752 116 Updated Aug 1, 2024

CGRs, molecules and reactions manipulation

Python 51 23 Updated Oct 31, 2022

Graph-based molecule modeling toolkit for cheminformatics

Julia 219 26 Updated Feb 28, 2026

Clinical Knowledge Graph (CKG) is a platform with twofold objective: 1) build a graph database with experimental data and data imported from diverse biomedical databases 2) automate knowledge disco…

Jupyter Notebook 586 122 Updated Sep 11, 2025

Compounds selection and enrichment protocol

R 4 4 Updated Nov 25, 2021

napari: a fast, interactive, multi-dimensional image viewer for python

Python 2,608 477 Updated Mar 13, 2026

GSoC 2020 project to integrate the RDKit and MongoDb

Python 16 7 Updated Apr 8, 2024

CHARMM and AMBER forcefields for OpenMM (with small molecule support)

Rich Text Format 352 85 Updated Mar 4, 2026

Solvation Structure and Thermodynamic Mapping

Python 42 26 Updated Dec 17, 2025

Parallel computing with task scheduling

Python 13,765 1,854 Updated Mar 12, 2026
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